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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs73173168 chr8:3241735 G/C CSMD1 chr8:2792875-4852494:- -0.32 -6.15 1.65E-9 Box Plot
THCA rs73179174 chr22:50088081 T/A C2orf42 chr2:70377012-70475747:- -0.48 -6.17 1.48E-9 Box Plot
THCA rs73179176 chr22:50088252 C/T C2orf42 chr2:70377012-70475747:- -0.48 -6.17 1.48E-9 Box Plot
THCA rs73189192 chr8:9910639 C/T SGK223 chr8:8175258-8244008:- 0.39 6.95 1.21E-11 Box Plot
THCA rs73196884 chr8:10864186 G/A SGK223 chr8:8175258-8244008:- 0.39 6.95 1.2E-11 Box Plot
THCA rs73196885 chr8:10864318 C/T SGK223 chr8:8175258-8244008:- 0.41 7.18 2.71E-12 Box Plot
THCA rs73197281 chr8:10263282 T/C SGK223 chr8:8175258-8244008:- 0.32 6.08 2.39E-9 Box Plot
THCA rs73198970 chr8:11040216 T/C SGK223 chr8:8175258-8244008:- 0.46 8.64 8.41E-17 Box Plot
THCA rs73272056 chr14:66770288 T/C ATP6V1D chr14:67761088-67826982:- 0.44 7.82 3.29E-14 Box Plot
THCA rs73272064 chr14:66778072 G/A ATP6V1D chr14:67761088-67826982:- 0.42 7.41 5.72E-13 Box Plot
THCA rs73273927 chr14:66818707 G/C ATP6V1D chr14:67761088-67826982:- 0.41 7.21 2.15E-12 Box Plot
THCA rs73289207 chr10:46053862 G/A AGAP7 chr10:51464162-51486327:- 0.36 6.37 4.45E-10 Box Plot
THCA rs7329600 chr13:82124191 C/T LHX1 chr17:35294084-35301912:+ 0.34 6.14 1.71E-9 Box Plot
THCA rs7330488 chr13:82095510 G/A LHX1 chr17:35294084-35301912:+ 0.31 6.13 1.86E-9 Box Plot
THCA rs73315603 chr10:51816948 C/G FAM21B chr10:47894023-47949412:+ 0.58 7.64 1.17E-13 Box Plot